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An operon is ________.


A) a set of genes whose transcription is controlled by a single promoter
B) the site of repressor binding
C) a protein that activates the transcription of a whole class of genes
D) a multisubunit complex responsible for the splicing of exons

E) A) and D)
F) A) and C)

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RNase D is an endonuclease that adds CCA to the 3' end of tRNA.

A) True
B) False

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Which is not a feature of eukaryotic mRNA processing?


A) Addition of a 5'-5' triphosphate linkage to GTP.
B) Methylation of the terminal CCA triad.
C) Addition of a polyA tail to the 3' end.
D) Removal of intron sequences.

E) B) and C)
F) A) and D)

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TFIIB can bind to DNA in the absence of TFIID.

A) True
B) False

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Which of the following is true about transcription?


A) Promoters are regions of DNA which serve as transcription initiation sites.
B) Initiation is the rate-limiting step in transcription.
C) Each gene,in eukaryotic cells,usually has its own promoter.
D) All of the above.

E) B) and C)
F) All of the above

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RNA polymerase requires a high-precision fit when catalyzing the formation of a new phosphodiester linkage.

A) True
B) False

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Positive regulation of a gene requires ________.


A) an activator protein
B) positive cooperativity
C) an allosteric inducer
D) the conversion of ATP to ADP and inorganic phosphate

E) All of the above
F) C) and D)

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Which has its primary transcript produced in the nucleolus?


A) tRNA
B) mRNA
C) rRNA
D) sRNA

E) B) and C)
F) All of the above

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Which is true about the GTP cap on mRNA?


A) The 5' carbon of the GTP sugar is connected via phosphates to the 5' end of the mRNA.
B) The 5' carbon of the GTP sugar is connected via phosphates to the 3' end of the mRNA.
C) The 3' carbon of the GTP sugar is connected via phosphates to the 5' end of the mRNA.
D) The 3' carbon of the GTP sugar is connected via phosphates to the 3' end of the mRNA.

E) All of the above
F) B) and C)

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Which statement is false about the utilization of lactose as a carbon source by E.coli?


A) In the presence of both glucose and lactose,the enzymes necessary for lactose catabolism are produced only in limited amounts.
B) Lactose is the inducer for the enzymes responsible for its own catabolism.
C) In the absence of lactose,the repressor binds to a single site upstream of the lac genes.
D) The catabolic enzymes are encoded in a three-gene operon controlled by a single promoter.

E) B) and C)
F) A) and B)

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Which is not true about the lac repressor?


A) Its gene is part of the lac operon and is transcribed along with lacZ,lacA and lacY.
B) When it binds to DNA,it forms a loop-type structure.
C) It likely blocks both RNA polymerase binding as well as transcription initiation.
D) It binds to DNA by interaction of an α-helix with the major groove.

E) A) and B)
F) A) and C)

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What does it mean to say that the most common type of promoter in E.coli is bipartite?


A) The promoter region is divided into two parts which flank the sequence for the gene.
B) There are two separate regions of sequence similarity in the promoter.
C) The sequence of the promoter has dyad symmetry.
D) The promoter must bind two RNA polymerase holoenzymes to transcribe the gene.

E) A) and C)
F) A) and D)

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Which of the following is an incorrect association between transcription factors and their characteristics?


A) TFIIB : interacts with RNA polymerase II.
B) SP1: binds to GC-rich sequence.
C) TFIIH: couples transcription to DNA repair.
D) TFIIE : recognizes the core sequence CCAAT.
E) All of the above.

F) C) and D)
G) A) and D)

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The same RNA polymerase that transcribes the ribosomal RNA transcribes all mitochondrial genes.

A) True
B) False

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Protein X is found to bind to a certain gene's promoter only when substance A is not present.The gene can be transcribed in the presence of both X and A.It is not transcribed in the presence of X alone.Protein X is a(n) ________.Substance A is a(n) ________.


A) repressor;inducer
B) repressor;corepressor
C) activator;inducer
D) activator;corepressor

E) A) and C)
F) A) and D)

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Which statement is false about operons that have the feature of catabolic repression?


A) Several different multisubunit repressors can block the transcription of such an operon.
B) Operons with catabolic repression have characteristically weak promoters.
C) Their transcription is lowered in the presence of glucose.
D) Transcription of such an operon is increased as the concentration of cAMP increases.

E) None of the above
F) All of the above

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The unwinding of DNA at the initiation site is an example of a conformational change.

A) True
B) False

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A transcription complex does not form when one or more proteins bind to the promoter sequence and to RNA polymerase in eukaryotes.

A) True
B) False

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Which statement is false concerning the general transcription factor,TFIID?


A) It binds to the promoter.
B) Its TBP subunit binds to the region containing the TATA box.
C) It interacts with TFIIA in the presence of DNA.
D) It is the RNA polymerase II initiation factor.
E) None of the above.

F) None of the above
G) B) and E)

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Transcription sometimes stops near pause sites because these are regions


A) rich in GC base pairs.
B) rich in AT base pairs.
C) without palindromic sequences.
D) where Nus A is not present.

E) A) and B)
F) A) and C)

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